Last updated: 2023-12-12

Checks: 2 0

Knit directory: uci_covid19_dashboard/

This reproducible R Markdown analysis was created with workflowr (version 1.6.2). The Checks tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.


Great! Since the R Markdown file has been committed to the Git repository, you know the exact version of the code that produced these results.

Great! You are using Git for version control. Tracking code development and connecting the code version to the results is critical for reproducibility.

The results in this page were generated with repository version 14bb7d6. See the Past versions tab to see a history of the changes made to the R Markdown and HTML files.

Note that you need to be careful to ensure that all relevant files for the analysis have been committed to Git prior to generating the results (you can use wflow_publish or wflow_git_commit). workflowr only checks the R Markdown file, but you know if there are other scripts or data files that it depends on. Below is the status of the Git repository when the results were generated:


Ignored files:
    Ignored:    .Renviron

Untracked files:
    Untracked:  r_env.yml
    Untracked:  rebuild

Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.


These are the previous versions of the repository in which changes were made to the R Markdown (analysis/about.Rmd) and HTML (docs/about.html) files. If you’ve configured a remote Git repository (see ?wflow_git_remote), click on the hyperlinks in the table below to view the files as they were in that past version.

File Version Author Date Message
html 14bb7d6 markellekelly 2023-12-11 automatic update - 2023-12-11
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html ac0a2e2 markellekelly 2022-06-23 automatic update - 2022-06-23
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html b455e58 markellekelly 2022-06-21 automatic update - 2022-06-21
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html cda86eb markellekelly 2022-06-09 automatic update - 2022-06-09
html ec417de markellekelly 2022-06-08 automatic update - 2022-06-08
html 3fe2b2f Damon Bayer 2022-06-08 2022-06-07 Update
html 4c0fb43 markellekelly 2022-06-07 automatic update - 2022-06-07
html fcf4f96 markellekelly 2022-06-06 automatic update - 2022-06-06
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html 1649d03 markellekelly 2022-06-03 automatic update - 2022-06-03
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html c40de1a markellekelly 2022-06-01 automatic update - 2022-06-01
html d7e86f1 markellekelly 2022-05-31 automatic update - 2022-05-31
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html 2ff1ad6 Damon Bayer 2022-05-24 2022-05-24 Update
html e8ec710 markellekelly 2022-05-24 automatic update - 2022-05-24
html e16f247 markellekelly 2022-05-23 automatic update - 2022-05-23
html 8257af2 markellekelly 2022-05-22 automatic update - 2022-05-22
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html 12df35a markellekelly 2022-05-20 automatic update - 2022-05-20
html fadb407 markellekelly 2022-05-19 automatic update - 2022-05-19
html 5cf79c5 Damon Bayer 2022-05-18 2022-05-17 Update
html 3e486e3 markellekelly 2022-05-18 automatic update - 2022-05-18
html afaad9c markellekelly 2022-05-17 automatic update - 2022-05-17
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html 4858a85 markellekelly 2022-05-12 automatic update - 2022-05-12
html 7752b06 markellekelly 2022-05-11 automatic update - 2022-05-11
html 2b39d18 Damon Bayer 2022-05-10 2022-05-10 Update
html 132f7f8 markellekelly 2022-05-10 automatic update - 2022-05-10
html 0f11411 markellekelly 2022-05-09 automatic update - 2022-05-09
html ebbbe30 markellekelly 2022-05-08 automatic update - 2022-05-08
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html e3b6f33 markellekelly 2022-05-06 automatic update - 2022-05-06
html 5374d4b markellekelly 2022-05-05 automatic update - 2022-05-05
html d952f1a Damon Bayer 2022-05-04 2022-05-04 Update
html aaa0fa0 markellekelly 2022-05-04 automatic update - 2022-05-04
html 9cf84c9 markellekelly 2022-05-03 automatic update - 2022-05-03
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html ae326ec markellekelly 2022-04-27 automatic update - 2022-04-27
html d6715db markellekelly 2022-04-26 automatic update - 2022-04-26
html 038a6e3 Damon Bayer 2022-04-26 2022-04-26 Update
html 85d1af5 markellekelly 2022-04-25 parsing fix
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html 02bfd58 Damon Bayer 2022-04-19 2022-04-19 Update
html 215df97 markellekelly 2022-04-09 automatic update - 2022-04-09
html 12365a3 markellekelly 2022-04-08 automatic update - 2022-04-08
html 2801b1d Damon Bayer 2022-04-07 2022-04-07 Update
html 857af32 Damon Bayer 2022-04-06 2022-03-31 Update (Late)
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html f56cc36 markellekelly 2022-03-27 automatic update - 2022-03-27
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html 4d0e3bc markellekelly 2022-03-18 automatic update - 2022-03-18
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html 2e760a1 Damon Bayer 2022-03-10 2022-03-10 Update
html 3430159 markellekelly 2022-03-10 automatic update - 2022-03-10
html 380f410 markellekelly 2022-03-09 automatic update - 2022-03-09
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html ee9a7de Damon Bayer 2022-03-03 2022-03-03 Update
html 9ce795e markellekelly 2022-03-03 automatic update - 2022-03-03
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html 576b8a2 Damon Bayer 2022-02-24 2022-02-24 Update
html a9176f3 markellekelly 2022-02-24 automatic update - 2022-02-24
html 8b48c1d markellekelly 2022-02-23 automatic update - 2022-02-23
html d681345 markellekelly 2022-02-22 automatic update - 2022-02-22
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html d100262 Damon Bayer 2022-02-18 2022-02-17 Update
html 12f688a markellekelly 2022-02-17 automatic update - 2022-02-17
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html 61b9138 markellekelly 2022-02-11 automatic update - 2022-02-11
html 35d251c Damon Bayer 2022-02-11 2022-02-10 Update
html 90395c3 markellekelly 2022-02-10 automatic update - 2022-02-10
html 00cc9de markellekelly 2022-02-09 automatic update - 2022-02-09
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html 4be19b0 markellekelly 2022-02-06 automatic update - 2022-02-06
html 5c18f56 Damon Bayer 2022-02-05 2022-02-03 Update
html b88000c markellekelly 2022-02-05 automatic update - 2022-02-05
html d4acf60 markellekelly 2022-02-04 automatic update - 2022-02-04
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html 704727f Damon Bayer 2022-01-27 2022-01-27 Update
html 5125a48 markellekelly 2022-01-27 automatic update - 2022-01-27
html a98a97d markellekelly 2022-01-26 automatic update - 2022-01-26
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html 3beb788 Damon Bayer 2022-01-21 2022-01-20 Update
html 9f5c145 markellekelly 2022-01-20 automatic update - 2022-01-20
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html edc9c32 Damon Bayer 2022-01-06 2022-01-06 Update
html 1ee6f0c markellekelly 2022-01-06 automatic update - 2022-01-06
html 2bc5a6c markellekelly 2022-01-05 automatic update - 2022-01-05
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html 5072647 markellekelly 2021-12-31 automatic update - 2021-12-31
html e6c0b1c markellekelly 2021-12-30 automatic update - 2021-12-30
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html 9390593 Damon Bayer 2021-12-23 2021-12-23 Update
html 3892630 markellekelly 2021-12-23 automatic update - 2021-12-23
html 7782b6f markellekelly 2021-12-22 automatic update - 2021-12-22
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html 28f41db markellekelly 2021-12-17 automatic update - 2021-12-17
html 1e7d260 Damon Bayer 2021-12-16 2021-12-16 Update
html 365c66f markellekelly 2021-12-16 automatic update - 2021-12-16
html cb70261 markellekelly 2021-12-15 automatic update - 2021-12-15
html c61287c markellekelly 2021-12-14 automatic update - 2021-12-14
html 8dee53e markellekelly 2021-12-13 automatic update - 2021-12-13
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html 93c316e markellekelly 2021-12-10 automatic update - 2021-12-10
html cca5b39 markellekelly 2021-12-09 automatic update - 2021-12-09
html a31d469 Damon Bayer 2021-12-09 2021-12-09 Update
html 2553009 markellekelly 2021-12-08 automatic update - 2021-12-08
html 7ad18f3 markellekelly 2021-12-07 automatic update - 2021-12-07
html ab4e642 markellekelly 2021-12-06 automatic update - 2021-12-06
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html fc8395e markellekelly 2021-12-01 automatic update - 2021-12-01
html 58251de markellekelly 2021-11-30 automatic update - 2021-11-30
html c13561c Damon Bayer 2021-11-29 2021-11-29 Update
html 1868ddb markellekelly 2021-11-29 automatic update - 2021-11-29
html 51fa73b markellekelly 2021-11-28 automatic update - 2021-11-28
html f604630 markellekelly 2021-11-27 automatic update - 2021-11-27
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html c9abb99 markellekelly 2021-11-23 automatic update - 2021-11-23
html 250c92b markellekelly 2021-11-22 automatic update - 2021-11-22
html b39ee57 Damon Bayer 2021-11-22 2021-11-22 Updat
html 25dcfb9 markellekelly 2021-11-21 automatic update - 2021-11-21
html e354d3d markellekelly 2021-11-20 automatic update - 2021-11-20
html 9a1e8fd markellekelly 2021-11-19 automatic update - 2021-11-19
html 75a87f0 markellekelly 2021-11-18 automatic update - 2021-11-18
html 0a632b3 markellekelly 2021-11-17 automatic update - 2021-11-17
html cc43f28 markellekelly 2021-11-16 automatic update - 2021-11-16
html 2fdd224 Damon Bayer 2021-11-15 2021-11-15 Update
html a61f46b markellekelly 2021-11-15 automatic update - 2021-11-15
html 391cfa4 markellekelly 2021-11-14 automatic update - 2021-11-14
html 5f67bc3 markellekelly 2021-11-13 automatic update - 2021-11-13
html e8476c6 markellekelly 2021-11-12 automatic update - 2021-11-12
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html d2b95be markellekelly 2021-11-10 automatic update - 2021-11-10
html 20836d6 markellekelly 2021-11-09 automatic update - 2021-11-09
html 427010d Damon Bayer 2021-11-08 2021-11-08 Update Redux
html 2cc66a5 Damon Bayer 2021-11-08 2021-11-08 Update
html 41ba870 markellekelly 2021-11-08 automatic update - 2021-11-08
html dc4218e markellekelly 2021-11-07 automatic update - 2021-11-07
html c5da767 markellekelly 2021-11-06 automatic update - 2021-11-06
html c1ea835 markellekelly 2021-11-05 automatic update - 2021-11-05
html e3218b7 Damon Bayer 2021-11-04 2021-11-01 Redux
html ce715a6 markellekelly 2021-11-04 automatic update - 2021-11-04
html dc9c2a6 markellekelly 2021-11-03 automatic update - 2021-11-03
html 805e558 markellekelly 2021-11-02 automatic update - 2021-11-02
html 73ffebd markellekelly 2021-11-01 automatic update - 2021-11-01
html 29d0de0 Damon Bayer 2021-11-01 2021-11-01 Update
html 1acdaf6 markellekelly 2021-10-31 automatic update - 2021-10-31
html 61e9868 markellekelly 2021-10-30 automatic update - 2021-10-30
html edfd606 markellekelly 2021-10-29 automatic update - 2021-10-29
html 974177e markellekelly 2021-10-28 automatic update - 2021-10-28
html add1d3c markellekelly 2021-10-27 automatic update - 2021-10-27
html 9ee1cf6 markellekelly 2021-10-26 automatic update - 2021-10-26
html 4465525 markellekelly 2021-10-25 automatic update - 2021-10-25
html 8eb3c18 Damon Bayer 2021-10-25 2021-10-25 Update
html 2bc98e2 markellekelly 2021-10-24 automatic update - 2021-10-24
html 5103ea0 markellekelly 2021-10-23 automatic update - 2021-10-23
html 928264d markellekelly 2021-10-22 automatic update - 2021-10-22
html 70b4216 markellekelly 2021-10-21 automatic update - 2021-10-21
html 596843d markellekelly 2021-10-20 automatic update - 2021-10-20
html fd90c95 markellekelly 2021-10-19 automatic update - 2021-10-19
html 1a79f98 Damon Bayer 2021-10-18 2021-10-18 Update (Full Rebuild)
html 47e1648 markellekelly 2021-10-18 automatic update - 2021-10-18
html f93d4bf markellekelly 2021-10-17 automatic update - 2021-10-17
html e5a8ef7 markellekelly 2021-10-16 automatic update - 2021-10-16
html 2e8651e markellekelly 2021-10-15 automatic update - 2021-10-15
html afbc0a1 markellekelly 2021-10-14 automatic update - 2021-10-14
html 5a7977d vnminin 2021-10-13 rebuilt to update city trend plots
html 2829fd0 markellekelly 2021-10-13 automatic update - 2021-10-13
html 3f02cb5 markellekelly 2021-10-12 automatic update - 2021-10-12
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html 6847144 markellekelly 2021-10-10 automatic update - 2021-10-10
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html f9a5bc1 markellekelly 2021-10-08 automatic update - 2021-10-08
html 0bacb1a markellekelly 2021-10-07 automatic update - 2021-10-07
html 05c4c32 markellekelly 2021-10-06 automatic update - 2021-10-06
html 093bd02 markellekelly 2021-10-05 automatic update - 2021-10-05
html d9631ef vnminin 2021-10-05 another small date tweak
html bc0d8fc vnminin 2021-10-04 made dates more spread out
html 327a14f vnminin 2021-10-04 publishing city update
html 5f822fd markellekelly 2021-10-04 automatic update - 2021-10-04
html 345f55e markellekelly 2021-10-03 automatic update - 2021-10-03
html 732e040 markellekelly 2021-10-02 automatic update - 2021-10-02
html 70e2c65 markellekelly 2021-10-01 automatic update - 2021-10-01
html f3a6312 markellekelly 2021-09-30 automatic update - 2021-09-30
html a5b7069 markellekelly 2021-09-29 automatic update - 2021-09-29
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html 97a0f92 markellekelly 2021-09-27 automatic update - 2021-09-27
html 8fc7e76 markellekelly 2021-09-26 automatic update - 2021-09-26
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html 833dd76 markellekelly 2021-09-22 automatic update - 2021-09-22
html 866712e markellekelly 2021-09-21 automatic update - 2021-09-21
html 67b0c80 vnminin 2021-09-20 Sep 20, 2021 update
html bc9db27 markellekelly 2021-09-20 automatic update - 2021-09-20
html 499fd2d markellekelly 2021-09-19 automatic update - 2021-09-19
html c1d71c6 markellekelly 2021-09-18 automatic update - 2021-09-18
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html d21bc1d vnminin 2021-09-13 Sep 13 2021 update
html 66290ea vnminin 2021-09-13 trying to add central california
html cba8778 markellekelly 2021-09-13 automatic update - 2021-09-13
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html a672293 markellekelly 2021-09-11 automatic update - 2021-09-11
html 45ea62e markellekelly 2021-09-10 automatic update - 2021-09-10
html 851e1b0 markellekelly 2021-09-09 automatic update - 2021-09-09
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html 2744dff vnminin 2021-09-07 Sep 7 2021 update
html de87716 markellekelly 2021-09-07 automatic update - 2021-09-07
html f62e00b markellekelly 2021-09-06 automatic update - 2021-09-06
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html 417fed7 markellekelly 2021-09-04 automatic update - 2021-09-04
html 9347cb4 markellekelly 2021-09-03 automatic update - 2021-09-03
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html c8c7ec6 markellekelly 2021-09-01 automatic update - 2021-09-01
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html e27cd49 markellekelly 2021-08-28 automatic update - 2021-08-28
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html be951bb vnminin 2021-08-25 testing build update
html 0007ace vnminin 2021-08-25 Aug 24 update
html ca9cac6 markellekelly 2021-08-25 automatic update - 2021-08-25
html 80b5461 vnminin 2021-08-23 another commit after republishing
html cb17781 vnminin 2021-08-23 city trends and map updates
html 0e19374 markellekelly 2021-08-23 automatic update - 2021-08-23
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html c2986cf vnminin 2021-08-21 trying to fix maps
html f75690d vnminin 2021-08-21 not sure what I changed
html 8728987 markellekelly 2021-08-21 automatic update - 2021-08-21
html e66c441 markellekelly 2021-08-20 automatic update - 2021-08-20
html b3d348c markellekelly 2021-08-19 automatic update - 2021-08-19
html bfa2217 vnminin 2021-08-18 adding data for maps
html 1382194 markellekelly 2021-08-18 automatic update - 2021-08-18
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html 9d82d79 vnminin 2021-08-09 Aug 9 city and maps update
html 1178d36 markellekelly 2021-08-08 automatic update - 2021-08-08
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html 717240c vnminin 2021-08-02 city trends update Aug 2 2021
html 40d3fa7 markellekelly 2021-08-02 automatic update - 2021-08-02
html c579001 markellekelly 2021-08-01 automatic update - 2021-08-01
html b460baf markellekelly 2021-07-31 automatic update - 2021-07-31
html b3b2d06 markellekelly 2021-07-30 automatic update - 2021-07-30
html 6463e9d vnminin 2021-07-29 map update
html cdd2d80 markellekelly 2021-07-29 automatic update - 2021-07-29
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html 7daff1f vnminin 2021-07-26 July 26 2021 city trends update
html 14cb63c markellekelly 2021-07-26 automatic update - 2021-07-26
html e731cae markellekelly 2021-07-25 automatic update - 2021-07-25
html c5b03da markellekelly 2021-07-24 automatic update - 2021-07-24
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html 5a02e10 vnminin 2021-07-21 July 19 2021 update
html e1dd119 markellekelly 2021-07-21 automatic update - 2021-07-21
html d776661 markellekelly 2021-07-20 automatic update - 2021-07-20
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html 3c1caa6 vnminin 2021-07-13 July 12 update
html dce3353 markellekelly 2021-07-13 automatic update - 2021-07-13
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html 79c3b4e markellekelly 2021-07-07 automatic update - 2021-07-07
html 4e24344 vnminin 2021-07-06 July 6 update
html 3a65d32 markellekelly 2021-07-06 automatic update - 2021-07-06
html a670896 markellekelly 2021-07-05 automatic update - 2021-07-05
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html f1afd00 markellekelly 2021-07-02 automatic update - 2021-07-02
html 258af08 markellekelly 2021-07-01 automatic update - 2021-07-01
html 1907665 markellekelly 2021-06-30 automatic update - 2021-06-30
html b4574df vnminin 2021-06-29 city trends update
html 761bc91 markellekelly 2021-06-29 automatic update - 2021-06-29
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html 3cf22ae vnminin 2021-06-24 city update
html 22c02af markellekelly 2021-06-24 automatic update - 2021-06-24
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html e5b739b markellekelly 2021-06-22 automatic update - 2021-06-22
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html 0c5d4fb markellekelly 2021-06-20 automatic update - 2021-06-20
html 8cc37dc markellekelly 2021-06-19 automatic update - 2021-06-19
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html c1e3b51 markellekelly 2021-06-15 automatic update - 2021-06-15
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html 9b77f32 markellekelly 2021-06-06 automatic update - 2021-06-06
html 1efc12e markellekelly 2021-06-05 automatic update - 2021-06-05
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html e5f8bd5 markellekelly 2021-06-03 automatic update - 2021-06-03
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html d55b02e markellekelly 2021-05-30 automatic update - 2021-05-30
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html c1c7ebf markellekelly 2021-05-26 automatic update - 2021-05-26
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html d51f4a5 markellekelly 2021-05-24 automatic update - 2021-05-24
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html 2766593 Damon Bayer 2021-05-17 Manual Update 2021-05-17
html f50d6d0 Damon Bayer 2021-05-13 Manual Update 2021-05-13
html e249bd5 markellekelly 2021-05-13 automatic update - 2021-05-13
html afc6eca markellekelly 2021-05-12 automatic update - 2021-05-12
html 522636c markellekelly 2021-05-11 automatic update - 2021-05-11
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html fc2cf49 markellekelly 2021-05-09 automatic update - 2021-05-09
html 09cee58 markellekelly 2021-05-08 automatic update - 2021-05-08
html 13da6a0 markellekelly 2021-05-07 automatic update - 2021-05-07
html 81f04be markellekelly 2021-05-06 automatic update - 2021-05-06
html 1c7a6c4 markellekelly 2021-05-05 automatic update - 2021-05-05
html 2d8feff markellekelly 2021-05-04 automatic update - 2021-05-04
html 556ee4c markellekelly 2021-05-03 automatic update - 2021-05-03
html a0f0553 markellekelly 2021-05-02 automatic update - 2021-05-02
html e1b92ff markellekelly 2021-05-01 automatic update - 2021-05-01
html ba0461f markellekelly 2021-04-30 automatic update - 2021-04-30
html 60bdb2e markellekelly 2021-04-29 automatic update - 2021-04-29
html 9c705fd markellekelly 2021-04-28 automatic update - 2021-04-28
html 839fc4f markellekelly 2021-04-27 automatic update - 2021-04-27
html e42c5e5 Damon Bayer 2021-04-26 Fix for changed filename
html ba2f757 markellekelly 2021-04-26 automatic update - 2021-04-26
html e5a0089 markellekelly 2021-04-25 automatic update - 2021-04-25
html 06f615c markellekelly 2021-04-24 automatic update - 2021-04-24
html 7e849b7 markellekelly 2021-04-23 automatic update - 2021-04-23
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html f79c3af markellekelly 2021-04-21 automatic update - 2021-04-21
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html dc6bd41 markellekelly 2021-04-16 automatic update - 2021-04-16
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html a5a2784 markellekelly 2021-04-14 automatic update - 2021-04-14
html 795f956 markellekelly 2021-04-13 automatic update - 2021-04-13
html 1138120 Damon Bayer 2021-04-12 2021-04-12 City Data
html 5899f38 Damon Bayer 2021-04-12 Fix icons and manual update
html e7de0c2 markellekelly 2021-04-12 automatic update - 2021-04-12
html 680259d markellekelly 2021-04-11 automatic update - 2021-04-11
html c08d5e1 markellekelly 2021-04-10 auto update test one more time
html f3d84e8 markellekelly 2021-04-10 auto update test
html 94ab620 markellekelly 2021-04-10 automatic update - 2021-04-10
html 0f4c3df markellekelly 2021-04-09 automatic update - 2021-04-09
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html b076ccd markellekelly 2021-03-19 automatic update - 2021-03-19
html 047e474 markellekelly 2021-03-18 automatic update - 2021-03-18
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html 0ca0428 vnminin 2021-01-14 changed lag from 11 to 5 days and increased spacing between dates
html d3dd038 vnminin 2021-01-14 not sure what I changed in about page
html fe24c63 markellekelly 2021-01-14 automatic update - 2021-01-14
html a5b4d5a markellekelly 2021-01-13 automatic update - 2021-01-13
html d3b8a7b markellekelly 2021-01-12 automatic update - 2021-01-12
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html 7826b90 markellekelly 2020-12-29 automatic update - 2020-12-29
html d50b839 markellekelly 2020-12-28 automatic update - 2020-12-28
html bfda24c markellekelly 2020-12-27 automatic update - 2020-12-27
html a154af4 markellekelly 2020-12-26 automatic update - 2020-12-26
html dcd525f markellekelly 2020-12-25 automatic update - 2020-12-25
html 6644b37 markellekelly 2020-12-24 automatic update - 2020-12-24
html 35209de markellekelly 2020-12-23 automatic update - 2020-12-23
html 49a1837 markellekelly 2020-12-22 automatic update - 2020-12-22
html ac4b4f8 markellekelly 2020-12-21 automatic update - 2020-12-21
html 497d09e markellekelly 2020-12-20 automatic update - 2020-12-20
html 892917f markellekelly 2020-12-19 automatic update - 2020-12-19
html b3b8c9b Jessica George 2020-12-18 Update times for OC maps
html 2b1530e markellekelly 2020-12-18 automatic update - 2020-12-18
html dc0429c Jessica George 2020-12-18 Updated maps
html 85af75a markellekelly 2020-12-17 automatic update - 2020-12-17
html aa6455b markellekelly 2020-12-16 automatic update - 2020-12-16
html 0ee5762 markellekelly 2020-12-15 automatic update - 2020-12-15
html 9668f9d Damon Bayer 2020-12-14 Publish new city result
html b4a2c23 markellekelly 2020-12-14 automatic update - 2020-12-14
html 2b09f1a Damon Bayer 2020-12-14 misc fixes
html 575459b markellekelly 2020-12-13 automatic update - 2020-12-13
html bd2faf6 markellekelly 2020-12-12 automatic update - 2020-12-12
html 04bc64a markellekelly 2020-12-11 automatic update - 2020-12-11
html 76448e0 markellekelly 2020-12-10 automatic update - 2020-12-10
html bc96ef6 markellekelly 2020-12-09 automatic update - 2020-12-09
html aabffb7 markellekelly 2020-12-08 automatic update - 2020-12-08
html ebff46d markellekelly 2020-12-07 automatic update - 2020-12-07
html 1268ef5 markellekelly 2020-12-06 automatic update - 2020-12-06
html 5267b99 markellekelly 2020-12-05 automatic update - 2020-12-05
html 25fffe6 markellekelly 2020-12-04 automatic update - 2020-12-04
html f08a457 markellekelly 2020-12-03 automatic update - 2020-12-03
html 2fdb3fd markellekelly 2020-12-02 automatic update - 2020-12-02
html 116465c Jessica George 2020-12-01 oc-city-changes
html b6a39bf markellekelly 2020-12-01 automatic update - 2020-12-01
html a5466ed markellekelly 2020-11-30 automatic update - 2020-11-30
html ceb22c2 markellekelly 2020-11-29 automatic update - 2020-11-29
html c9f55bd markellekelly 2020-11-28 automatic update - 2020-11-28
html ee86766 markellekelly 2020-11-27 automatic update - 2020-11-27
html 3083f07 markellekelly 2020-11-26 automatic update - 2020-11-26
html 13f2be0 markellekelly 2020-11-25 automatic update - 2020-11-25
html 42be784 markellekelly 2020-11-24 automatic update - 2020-11-24
html 85ee3ad markellekelly 2020-11-23 automatic update - 2020-11-23
html 34c1f94 markellekelly 2020-11-22 automatic update - 2020-11-22
html 28839c9 markellekelly 2020-11-21 automatic update - 2020-11-21
html be56dc4 markellekelly 2020-11-20 automatic update - 2020-11-20
html 3b70bd3 markellekelly 2020-11-19 automatic update - 2020-11-19
html f2d8202 markellekelly 2020-11-18 automatic update - 2020-11-18
html 22759c1 Damon Bayer 2020-11-17 Nov 16 Update
html 488493a markellekelly 2020-11-17 automatic update - 2020-11-17
html f43b0f8 markellekelly 2020-11-16 automatic update - 2020-11-16
html c5a66e5 Jessica George 2020-11-15 Coastal OC Color Adjustment
html 11522aa markellekelly 2020-11-15 automatic update - 2020-11-15
html c8e0e51 markellekelly 2020-11-14 automatic update - 2020-11-14
html 0ab8f6d markellekelly 2020-11-13 automatic update - 2020-11-13
html 39a5124 markellekelly 2020-11-12 automatic update - 2020-11-12
Rmd f2f3802 Damon Bayer 2020-11-12 Nov 9 Update + x-axis modification
html f2f3802 Damon Bayer 2020-11-12 Nov 9 Update + x-axis modification
Rmd 2c51830 Jessica George 2020-11-11 nov9-updates
html 2c51830 Jessica George 2020-11-11 nov9-updates
html 37750c4 markellekelly 2020-11-11 automatic update - 2020-11-11
html 337210b markellekelly 2020-11-10 automatic update - 2020-11-10
html ef5427d markellekelly 2020-11-09 automatic update - 2020-11-09
html ca57998 markellekelly 2020-11-08 automatic update - 2020-11-08
html c2f0040 markellekelly 2020-11-07 automatic update - 2020-11-07
html b9935a0 markellekelly 2020-11-06 automatic update - 2020-11-06
html 0521670 markellekelly 2020-11-05 automatic update - 2020-11-05
html 8ecb0d7 vnminin 2020-11-04 again resolved silly html conflicts
html c558b0d markellekelly 2020-11-04 automatic update - 2020-11-04
html ddd7d03 Jessica George 2020-11-03 nov2-updates
html f1efa15 markellekelly 2020-11-03 automatic update - 2020-11-03
html cdda3c8 markellekelly 2020-11-02 automatic update - 2020-11-02
html f0eb03d markellekelly 2020-11-01 automatic update - 2020-11-01
html 734187b markellekelly 2020-10-31 automatic update - 2020-10-31
html 5efa82f markellekelly 2020-10-30 automatic update - 2020-10-30
html 853af28 markellekelly 2020-10-29 automatic update - 2020-10-29
html 2977434 markellekelly 2020-10-28 automatic update - 2020-10-28
html ae0d991 markellekelly 2020-10-27 automatic update - 2020-10-27
html c03f470 Thanasi Bakis 2020-10-26 Oct 26 updates
html e27692a markellekelly 2020-10-26 automatic update - 2020-10-26
html 179b482 markellekelly 2020-10-25 automatic update - 2020-10-25
html 80b8055 markellekelly 2020-10-24 automatic update - 2020-10-24
html 6b6f62e markellekelly 2020-10-23 automatic update - 2020-10-23
html ae64517 markellekelly 2020-10-22 automatic update - 2020-10-22
html 74c516b markellekelly 2020-10-21 automatic update - 2020-10-21
html 1d49990 markellekelly 2020-10-20 automatic update - 2020-10-20
html 0c2be58 vnminin 2020-10-19 rebuilt because some maps were not showing up
html 149bf66 Thanasi Bakis 2020-10-19 Rebuild with changes
html 6dda957 Thanasi Bakis 2020-10-19 New maps and city trends
html 08d1e37 markellekelly 2020-10-19 automatic update - 2020-10-19
html 9bfe943 markellekelly 2020-10-18 automatic update - 2020-10-18
html 78e874b markellekelly 2020-10-17 automatic update - 2020-10-17
html cb0af7f markellekelly 2020-10-16 automatic update - 2020-10-16
html 6214d3e Damon Bayer 2020-10-16 Full rebuild
html e295ddb Thanasi Bakis 2020-10-15 Added OC 5 Most Populous Cities comparison
html 604470a Thanasi Bakis 2020-10-15 Added OC cities comparison dropdown
html f475202 markellekelly 2020-10-15 automatic update - 2020-10-15
html 9542e72 vnminin 2020-10-15 rebuilt the website after la-norcal. -> la-norcal.html fix
html 115207e markellekelly 2020-10-14 automatic update - 2020-10-14
html 330df49 markellekelly 2020-10-13 automatic update - 2020-10-13
html c07d12e markellekelly 2020-10-12 automatic update - 2020-10-12
html fe159f4 markellekelly 2020-10-11 automatic update - 2020-10-11
html 02325d6 markellekelly 2020-10-10 automatic update - 2020-10-10
html 699c993 markellekelly 2020-10-09 automatic update - 2020-10-09
html 2e3d5e3 markellekelly 2020-10-08 automatic update - 2020-10-08
Rmd f5fede4 igoldsteinh 2020-10-07 changed metric for percent positive tests
html f5fede4 igoldsteinh 2020-10-07 changed metric for percent positive tests
html ba2367e markellekelly 2020-10-07 automatic update - 2020-10-07
html c68c3ef markellekelly 2020-10-06 automatic update - 2020-10-06
Rmd cacac5c igoldsteinh 2020-10-05 update oc cities
html cacac5c igoldsteinh 2020-10-05 update oc cities
html 179221b markellekelly 2020-10-05 automatic update - 2020-10-05
html 615814b Damon Bayer 2020-10-04 Fix Stay at Home label location
html 6bd7330 markellekelly 2020-10-04 automatic update - 2020-10-04
html f305160 markellekelly 2020-10-03 automatic update - 2020-10-03
html c8bae6d markellekelly 2020-10-02 automatic update - 2020-10-02
html c829b01 markellekelly 2020-10-01 automatic update - 2020-10-01
html c81c8f5 markellekelly 2020-09-30 add oc-cities
html 522513d markellekelly 2020-09-30 automatic update - 2020-09-30
html c2e9a01 markellekelly 2020-09-29 automatic update - 2020-09-29
html 5ada0ac markellekelly 2020-09-28 automatic update - 2020-09-28
html 10029b4 markellekelly 2020-09-27 automatic update - 2020-09-27
Rmd d59635e igoldsteinh 2020-09-24 new data section in the about page
html d59635e igoldsteinh 2020-09-24 new data section in the about page
html 1453b97 markellekelly 2020-09-24 automatic update - 2020-09-24
html 8196bbf markellekelly 2020-09-23 automatic update - 2020-09-23
html fa99b64 markellekelly 2020-09-22 automatic update - 2020-09-22
html c661c7b markellekelly 2020-09-21 automatic update - 2020-09-21
html c926c92 markellekelly 2020-09-20 automatic update - 2020-09-20
html 805f322 markellekelly 2020-09-19 automatic update - 2020-09-19
html 2dfedff markellekelly 2020-09-18 automatic update - 2020-09-18
html 46d1c05 markellekelly 2020-09-17 automatic update - 2020-09-17
html 32397cb markellekelly 2020-09-16 automatic update - 2020-09-16
html 8a2d2d7 markellekelly 2020-09-15 automatic update - 2020-09-15
html 822d8a3 markellekelly 2020-09-14 automatic update - 2020-09-14
html ef2f2be markellekelly 2020-09-12 automatic update - 2020-09-12
html f0cfcae markellekelly 2020-09-11 automatic update - 2020-09-11
html 7ad9506 markellekelly 2020-09-10 automatic update - 2020-09-10
html 51bc9d4 markellekelly 2020-09-09 automatic update - 2020-09-09
html 0c63951 markellekelly 2020-09-08 automatic update - 2020-09-08
html cb3b11a markellekelly 2020-09-07 automatic update - 2020-09-07
html ac05fe5 markellekelly 2020-09-06 automatic update - 2020-09-06
html b42a33b markellekelly 2020-09-05 automatic update - 2020-09-05
html a61fdd8 markellekelly 2020-09-04 automatic update - 2020-09-04
html e2709b0 markellekelly 2020-09-03 automatic update - 2020-09-03
html 5296774 markellekelly 2020-09-02 automatic update - 2020-09-02
html 6048fdf markellekelly 2020-09-01 automatic update - 2020-09-01
html a27d38f markellekelly 2020-08-31 automatic update - 2020-08-31
html 74ceb0a markellekelly 2020-08-30 automatic update - 2020-08-30
html 44a84ad markellekelly 2020-08-29 automatic update - 2020-08-29
html 33918be markellekelly 2020-08-28 automatic update - 2020-08-28
html c2d1536 markellekelly 2020-08-27 automatic update - 2020-08-27
html c96e3f3 vnminin 2020-08-27 consistent message above trend plots
html cf421b9 markellekelly 2020-08-26 automatic update - 2020-08-26
html 9d099cd vnminin 2020-08-25 short dropdown menu names
html 726e8dc markellekelly 2020-08-25 automatic update - 2020-08-25
html e239a00 vnminin 2020-08-24 added a note about dropdown menus
html 518db49 Rachel Longjohn 2020-08-24 Merge branch ‘master’ into county-sets
html 2559f5d Rachel Longjohn 2020-08-24 add more county sets
html b79277f markellekelly 2020-08-24 automatic update - 2020-08-24
html f932f34 markellekelly 2020-08-23 automatic update - 2020-08-23
html eaad166 markellekelly 2020-08-22 automatic update - 2020-08-22
Rmd 8b79b5e vnminin 2020-08-21 added Andrew as an additional media contact
html 8b79b5e vnminin 2020-08-21 added Andrew as an additional media contact
html f30d34d markellekelly 2020-08-21 automatic update - 2020-08-21
html 7069376 markellekelly 2020-08-20 automatic update - 2020-08-20
html 223088a markellekelly 2020-08-19 automatic update - 2020-08-19
html 64a83bf markellekelly 2020-08-18 automatic update - 2020-08-18
html ae98627 vnminin 2020-08-14 daily date pull
html 24e4ed4 vnminin 2020-08-13 data update
html 616ee7e vnminin 2020-08-12 daily data update
html 8db6eb5 vnminin 2020-08-11 pushed a note about reporting system problems
html 0803f2b vnminin 2020-08-11 data update
html 19f2315 vnminin 2020-08-10 push with updated data
html a5927e7 vnminin 2020-08-09 rebuilding with new data
html 751c46f vnminin 2020-08-08 forgot to rebuild
Rmd 597d802 vnminin 2020-08-08 added Suellen Hopfer and Markelle Kelly to the group member list, swapped Andrew for Suellen as spokesperson
html fb0028a vnminin 2020-08-08 ca portal got data
html 9589b6d vnminin 2020-08-07 two time stamps
html 9648fc7 vnminin 2020-08-07 something
html 60756e0 Damon Bayer 2020-08-07 data update
html b3f0a7a vnminin 2020-08-06 rebuilding to fix testing not linking to itself
html 35e30c1 vnminin 2020-08-06 daily data update; I am a good robot
html 7334400 vnminin 2020-08-05 data update
html 6466f12 vnminin 2020-08-04 data pull and fixed the last date being cut off
html 5db0d2e vnminin 2020-08-03 data update
html 4afb037 vnminin 2020-08-02 forgot to republish
html e3847ed vnminin 2020-08-02 added testing maps
Rmd a2c2c61 vnminin 2020-08-01 added Software section to About
html a2c2c61 vnminin 2020-08-01 added Software section to About
html a873dd5 vnminin 2020-08-01 data update
html 8d0b6ce vnminin 2020-08-01 daily date update
html e024ad3 Damon Bayer 2020-07-31 Positivity Maps + Navigation Updates
html d621638 Damon Bayer 2020-07-31 Icons in navigation
html 490ebde vnminin 2020-07-31 daily data pull
html 4b572aa vnminin 2020-07-30 fixing Trends navigation
Rmd a8b89cf vnminin 2020-07-30 added maps sectio to About page
html a8b89cf vnminin 2020-07-30 added maps sectio to About page
html acc591d vnminin 2020-07-30 time stamp for maps
html a93ad42 vnminin 2020-07-30 now really changing filel name
html b785fc2 Damon Bayer 2020-07-30 Wider Maps page
html 7e4cb79 vnminin 2020-07-30 republishing just in case
html 244103f vnminin 2020-07-30 rebuilt just in case
html 9b1533f Damon Bayer 2020-07-30 Separate Maps Page
html cb818d8 Damon Bayer 2020-07-30 Added maps
html a4d0d51 vnminin 2020-07-29 pulling the most recent data from ca portal
Rmd c394748 vnminin 2020-07-28 not happy, but tired
html c394748 vnminin 2020-07-28 not happy, but tired
html cdd3081 vnminin 2020-07-28 still not happy
Rmd b03bd2f vnminin 2020-07-28 still not happy
Rmd c124229 vnminin 2020-07-28 not happy with mobile version
html c124229 vnminin 2020-07-28 not happy with mobile version
Rmd d9d640e vnminin 2020-07-28 making stat logo a little smaller
html d9d640e vnminin 2020-07-28 making stat logo a little smaller
Rmd 7d0bcf4 vnminin 2020-07-28 experimenting with spacing and sizing of logos
html 7d0bcf4 vnminin 2020-07-28 experimenting with spacing and sizing of logos
html 0590a7c Damon Bayer 2020-07-28 Even better colors
html a5a62c9 Damon Bayer 2020-07-28 Better Colors
Rmd db476c1 vnminin 2020-07-28 small About grammar edit
html db476c1 vnminin 2020-07-28 small About grammar edit
Rmd f770300 vnminin 2020-07-28 added links to logos
html f770300 vnminin 2020-07-28 added links to logos
Rmd 68acc48 vnminin 2020-07-28 added IDS logo
html 68acc48 vnminin 2020-07-28 added IDS logo
html 86b4d4a vnminin 2020-07-28 Build site.
Rmd d871090 vnminin 2020-07-27 completing merge
Rmd a00bcdd vnminin 2020-07-27 resized logos
html a00bcdd vnminin 2020-07-27 resized logos
Rmd 711a308 igoldsteinh 2020-07-27 proofreading
Rmd 1aad469 vnminin 2020-07-27 corrected typo
html 1aad469 vnminin 2020-07-27 corrected typo
html 7fbdfe8 vnminin 2020-07-27 completing merge
Rmd 0ec36bf vnminin 2020-07-27 added media bit to contact
html 0ec36bf vnminin 2020-07-27 added media bit to contact
html bb1619b Damon Bayer 2020-07-27 Some UCI Colors
Rmd 2964ef6 vnminin 2020-07-27 added joining the group to about
Rmd 7e96a35 vnminin 2020-07-27 added members to About page and more playing with logos
html 7e96a35 vnminin 2020-07-27 added members to About page and more playing with logos
Rmd 1f6de11 vnminin 2020-07-27 playing with logos
html 1f6de11 vnminin 2020-07-27 playing with logos
html abd9c55 Damon Bayer 2020-07-27 Update HTML
Rmd 01f6052 vnminin 2020-07-27 edits of About text
html 01f6052 vnminin 2020-07-27 edits of About text
html 84ab7e1 vnminin 2020-07-27 july 27 ca data update
html bab42bc vnminin 2020-07-26 triggering an update with latest data
Rmd 32001f7 igoldsteinh 2020-07-24 hopefully commented methods section
html f08c6cc Damon Bayer 2020-07-24 Watermark & Legend Fix
html eb680ce vnminin 2020-07-24 republishing to update plots
Rmd f07587a vnminin 2020-07-23 all plots start on the same date; moved subtitle to title
html f07587a vnminin 2020-07-23 all plots start on the same date; moved subtitle to title
html 9aa359e vnminin 2020-07-23 shortenting title for friendlier mobile version
html c14824c Damon Bayer 2020-07-23 Remove Home text
Rmd 4d981d1 vnminin 2020-07-22 started editing about
html 4d981d1 vnminin 2020-07-22 started editing about
html b4fb3ae Damon Bayer 2020-07-21 update 2020-07-21
html c95cee3 Damon Bayer 2020-07-20 Hide Workflowr buttons
html 5369804 Damon Bayer 2020-07-19 Update 2020-07-19
html 65c7195 Damon Bayer 2020-07-16 theme change
html 66110a1 Damon Bayer 2020-07-14 Initial Proof of Concept
Rmd 6151dc8 Damon Bayer 2020-07-14 Start workflowr project.

About

This is an effort to provide timely and understandable COVID-19 data visualizations to the public in Orange County, California. The effort is coordinated by the UC Irvine COVID Awareness Group, consisting of students and faculty from the following units at UC Irvine.

                   

UC Irvine COVID Awareness Group Members:

Damon Bayer, Bernadette Boden-Albala, Isaac Goldstein, Suellen Hopfer, Markelle Kelly, Rachel Longjohn, Vladimir Minin, Andrew Noymer, Daniel M. Parker, Padhraic Smyth, Thanasi Bakis, Jessica George.

Contact information:

If you would like to know more about technical details and/or to join the group, get in touch with Prof. Vladimir Minin. For general media inquiries contact Prof. Suellen Hopfer and/or Prof. Andrew Noymer. If you are a media organization and would like to use our images, you do not need to ask for permission. Just don’t forget to acknowledge UC Irvine COVID Awareness Group. The content of this site is licensed under the most permissive creative commons license (click on License tab in the navigation bar to learn more).

Methodology

Data

Figures of county-wide cases, deaths and hospitalizations over time have been created with publicly available data from the California Open Data Portal. Cases and deaths are counted by date reported, rather than the date the test was administered or date of death (if someone is tested on Friday, and the positive result is reported the following Tuesday, the case is counted for Tuesday).

Maps of cases have been created with data provided by the Orange County Health Care Agency. If an individual tested multiple times, only the first positive test was counted as a case.

Figures of OC city cases, deaths and tests over time have been created with data provided by the Orange County Health Care Agency. We report cases and tests by date test administered, and deaths by date of death, as opposed to date reported. If someone was tested on Friday, but the positive result is reported the following Tuesday, for these city specific figures we count the case for Friday. This data is different than publicly available data in the California Open Data Portal. Because of reporting delays, these figures will be updated less regularly, and will be at least ten days behind the present.

Moving Averages

Our figures present 7 day moving averages. This means that, for cases on July 7th, for example, we report the average number of cases per hundred thousand people during the period July 1st to July 7th. On July 8th, we report the average number of cases per hundred thousand people during the period July 2nd to July 8th, etc. We use moving averages as opposed to raw data (such as the actual number of cases per million people on July 7th) because cases can increase or decrease dramatically on a particular day, making it difficult to see trends in the time series of interest. Moving averages help highlight these trends more clearly.

In order to calculate, for example, cases per hundred thousand people, we take the number of cases reported in a county for a day, divide by the 2019 census population for that county and then multiply by 1 hundred thousand. We do this because different counties have very different population sizes (Los Angeles County has approximately 10 million while Orange County has approximately 3 million) and we want to provide numbers which are comparable across counties.

Percent Positivity

For the OC cities we calculate percent positive tests using a 7 day moving window. For instance, on July 7th, we report the total number of positive tests in the last 7 days (from July 1st to July 7th) divided by the total number of tests administered in the last 7 days. We again use a 7 day window to account for dramatic increases and decreases on particular days.

Testing Data

The number of daily new cases depends not only on the number of infected individuals in the population, but also on the number of tests performed. It would be much better to plot the positivity ratio (positive cases divided by the total number of tests) instead of cases. Unfortunately, the number of Covid-19 diagnostic tests performed in a day is not available at a county level from the California Open Data Portal at this time. LA and OC counties do have testing data available (LA COVID-19 data, OC COVID-19 Data), but we prefer to use one data source for county level figures for now.

Software

We used R software environment, tidyverse collection of R packages, workflowr R package, and QGIS geographic information system software.