Last updated: 2022-06-08

Checks: 7 0

Knit directory: uci_covid19_dashboard/

This reproducible R Markdown analysis was created with workflowr (version 1.7.0). The Checks tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.


Great! Since the R Markdown file has been committed to the Git repository, you know the exact version of the code that produced these results.

Great job! The global environment was empty. Objects defined in the global environment can affect the analysis in your R Markdown file in unknown ways. For reproduciblity it’s best to always run the code in an empty environment.

The command set.seed(20200714) was run prior to running the code in the R Markdown file. Setting a seed ensures that any results that rely on randomness, e.g. subsampling or permutations, are reproducible.

Great job! Recording the operating system, R version, and package versions is critical for reproducibility.

Nice! There were no cached chunks for this analysis, so you can be confident that you successfully produced the results during this run.

Great job! Using relative paths to the files within your workflowr project makes it easier to run your code on other machines.

Great! You are using Git for version control. Tracking code development and connecting the code version to the results is critical for reproducibility.

The results in this page were generated with repository version 4c0fb43. See the Past versions tab to see a history of the changes made to the R Markdown and HTML files.

Note that you need to be careful to ensure that all relevant files for the analysis have been committed to Git prior to generating the results (you can use wflow_publish or wflow_git_commit). workflowr only checks the R Markdown file, but you know if there are other scripts or data files that it depends on. Below is the status of the Git repository when the results were generated:


Ignored files:
    Ignored:    .DS_Store
    Ignored:    .Rhistory
    Ignored:    .Rproj.user/
    Ignored:    analysis/.DS_Store
    Ignored:    data/.DS_Store

Unstaged changes:
    Modified:   data/oc_city_data.csv
    Modified:   data/oc_zip_month_data.csv

Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.


These are the previous versions of the repository in which changes were made to the R Markdown (analysis/positivity-maps.Rmd) and HTML (docs/positivity-maps.html) files. If you’ve configured a remote Git repository (see ?wflow_git_remote), click on the hyperlinks in the table below to view the files as they were in that past version.

File Version Author Date Message
html da004cd Damon Bayer 2022-06-01 2022-05-31 Update
html 2ff1ad6 Damon Bayer 2022-05-24 2022-05-24 Update
html 5cf79c5 Damon Bayer 2022-05-18 2022-05-17 Update
html 2b39d18 Damon Bayer 2022-05-10 2022-05-10 Update
html d952f1a Damon Bayer 2022-05-04 2022-05-04 Update
html 038a6e3 Damon Bayer 2022-04-26 2022-04-26 Update
html 02bfd58 Damon Bayer 2022-04-19 2022-04-19 Update
html 2801b1d Damon Bayer 2022-04-07 2022-04-07 Update
html 857af32 Damon Bayer 2022-04-06 2022-03-31 Update (Late)
html 463ecb2 Damon Bayer 2022-03-28 2022-03-24 Update
html 6df85d3 Damon Bayer 2022-03-18 2022-03-17 Update
html 2e760a1 Damon Bayer 2022-03-10 2022-03-10 Update
html ee9a7de Damon Bayer 2022-03-03 2022-03-03 Update
html 576b8a2 Damon Bayer 2022-02-24 2022-02-24 Update
html d100262 Damon Bayer 2022-02-18 2022-02-17 Update
html 35d251c Damon Bayer 2022-02-11 2022-02-10 Update
html 5c18f56 Damon Bayer 2022-02-05 2022-02-03 Update
html 704727f Damon Bayer 2022-01-27 2022-01-27 Update
html 3beb788 Damon Bayer 2022-01-21 2022-01-20 Update
html edc9c32 Damon Bayer 2022-01-06 2022-01-06 Update
html 9390593 Damon Bayer 2021-12-23 2021-12-23 Update
html 1e7d260 Damon Bayer 2021-12-16 2021-12-16 Update
html a31d469 Damon Bayer 2021-12-09 2021-12-09 Update
html c13561c Damon Bayer 2021-11-29 2021-11-29 Update
html b39ee57 Damon Bayer 2021-11-22 2021-11-22 Updat
html 2fdd224 Damon Bayer 2021-11-15 2021-11-15 Update
html 427010d Damon Bayer 2021-11-08 2021-11-08 Update Redux
html 2cc66a5 Damon Bayer 2021-11-08 2021-11-08 Update
html e3218b7 Damon Bayer 2021-11-05 2021-11-01 Redux
html 29d0de0 Damon Bayer 2021-11-01 2021-11-01 Update
html 8eb3c18 Damon Bayer 2021-10-25 2021-10-25 Update
html 1a79f98 Damon Bayer 2021-10-18 2021-10-18 Update (Full Rebuild)
html 5a7977d vnminin 2021-10-13 rebuilt to update city trend plots
html d9631ef vnminin 2021-10-05 another small date tweak
html bc0d8fc vnminin 2021-10-04 made dates more spread out
html 327a14f vnminin 2021-10-04 publishing city update
html 2b66647 Catalina Medina 2021-09-26 new maps updated 9-26-2021
Rmd 714863c Catalina Medina 2021-09-26 removed chunk to delete doc image folder
html 67b0c80 vnminin 2021-09-20 Sep 20, 2021 update
html d21bc1d vnminin 2021-09-13 Sep 13 2021 update
html 66290ea vnminin 2021-09-13 trying to add central california
Rmd d3dc7ad Catalina Medina 2021-09-13 delete folder that holds old map images
html 2744dff vnminin 2021-09-07 Sep 7 2021 update
html be951bb vnminin 2021-08-25 testing build update
html 0007ace vnminin 2021-08-25 Aug 24 update
html ca9cac6 markellekelly 2021-08-25 automatic update - 2021-08-25
html 80b5461 vnminin 2021-08-23 another commit after republishing
html cb17781 vnminin 2021-08-23 city trends and map updates
html 0e19374 markellekelly 2021-08-23 automatic update - 2021-08-23
html 6a3c07d markellekelly 2021-08-22 automatic update - 2021-08-22
html c2986cf vnminin 2021-08-21 trying to fix maps
html f75690d vnminin 2021-08-21 not sure what I changed
html 8728987 markellekelly 2021-08-21 automatic update - 2021-08-21
html e66c441 markellekelly 2021-08-20 automatic update - 2021-08-20
html b3d348c markellekelly 2021-08-19 automatic update - 2021-08-19
html bfa2217 vnminin 2021-08-18 adding data for maps
html 9d82d79 vnminin 2021-08-09 Aug 9 city and maps update
Rmd 898be2e Catalina Medina 2021-08-08 max_date_in_data from .txt not .rds
html 1178d36 markellekelly 2021-08-08 automatic update - 2021-08-08
Rmd 64187cd Catalina Medina 2021-08-07 changed using .rds to .csv and .txt
html cdbb568 markellekelly 2021-08-07 automatic update - 2021-08-07
html 476571f markellekelly 2021-08-06 automatic update - 2021-08-06
html 4621d06 markellekelly 2021-08-05 automatic update - 2021-08-05
html 81e5506 markellekelly 2021-08-04 automatic update - 2021-08-04
html f1aef72 markellekelly 2021-08-03 automatic update - 2021-08-03
html 717240c vnminin 2021-08-02 city trends update Aug 2 2021
html 40d3fa7 markellekelly 2021-08-02 automatic update - 2021-08-02
html c579001 markellekelly 2021-08-01 automatic update - 2021-08-01
html b460baf markellekelly 2021-07-31 automatic update - 2021-07-31
html b3b2d06 markellekelly 2021-07-30 automatic update - 2021-07-30
html 6463e9d vnminin 2021-07-30 map update
html cdd2d80 markellekelly 2021-07-29 automatic update - 2021-07-29
html 2938f63 markellekelly 2021-07-28 automatic update - 2021-07-28
html 2089800 markellekelly 2021-07-27 automatic update - 2021-07-27
html 7daff1f vnminin 2021-07-27 July 26 2021 city trends update
html 14cb63c markellekelly 2021-07-26 automatic update - 2021-07-26
html e731cae markellekelly 2021-07-25 automatic update - 2021-07-25
html c5b03da markellekelly 2021-07-24 automatic update - 2021-07-24
html 9311878 markellekelly 2021-07-23 automatic update - 2021-07-23
html fcb687d markellekelly 2021-07-22 automatic update - 2021-07-22
html 5a02e10 vnminin 2021-07-22 July 19 2021 update
html e1dd119 markellekelly 2021-07-21 automatic update - 2021-07-21
html d776661 markellekelly 2021-07-20 automatic update - 2021-07-20
html b3852d2 markellekelly 2021-07-19 automatic update - 2021-07-19
html 309f0a5 markellekelly 2021-07-18 automatic update - 2021-07-18
html 86fe280 markellekelly 2021-07-17 automatic update - 2021-07-17
html 3cfd891 markellekelly 2021-07-16 automatic update - 2021-07-16
html 781194b markellekelly 2021-07-15 automatic update - 2021-07-15
html 776d790 markellekelly 2021-07-14 automatic update - 2021-07-14
html 3c1caa6 vnminin 2021-07-14 July 12 update
html dce3353 markellekelly 2021-07-13 automatic update - 2021-07-13
html c192ce4 markellekelly 2021-07-12 automatic update - 2021-07-12
html c4ff553 markellekelly 2021-07-11 automatic update - 2021-07-11
html 781f16a markellekelly 2021-07-10 automatic update - 2021-07-10
html a143f68 markellekelly 2021-07-09 automatic update - 2021-07-09
html f8a362b markellekelly 2021-07-08 automatic update - 2021-07-08
html 79c3b4e markellekelly 2021-07-07 automatic update - 2021-07-07
html 4e24344 vnminin 2021-07-07 July 6 update
html 3a65d32 markellekelly 2021-07-06 automatic update - 2021-07-06
html a670896 markellekelly 2021-07-05 automatic update - 2021-07-05
html 7210abc markellekelly 2021-07-04 automatic update - 2021-07-04
html 6636cbe markellekelly 2021-07-03 automatic update - 2021-07-03
html f1afd00 markellekelly 2021-07-02 automatic update - 2021-07-02
html 258af08 markellekelly 2021-07-01 automatic update - 2021-07-01
html 1907665 markellekelly 2021-06-30 automatic update - 2021-06-30
html b4574df vnminin 2021-06-29 city trends update
html 761bc91 markellekelly 2021-06-29 automatic update - 2021-06-29
html 8fc1949 markellekelly 2021-06-28 automatic update - 2021-06-28
html 8146477 markellekelly 2021-06-27 automatic update - 2021-06-27
html 63b1794 markellekelly 2021-06-26 automatic update - 2021-06-26
html 4b264e4 markellekelly 2021-06-25 automatic update - 2021-06-25
html 3cf22ae vnminin 2021-06-25 city update
html 22c02af markellekelly 2021-06-24 automatic update - 2021-06-24
html 2bb7110 markellekelly 2021-06-23 automatic update - 2021-06-23
html e5b739b markellekelly 2021-06-22 automatic update - 2021-06-22
html 0b556f5 markellekelly 2021-06-21 automatic update - 2021-06-21
html 0c5d4fb markellekelly 2021-06-20 automatic update - 2021-06-20
html 8cc37dc markellekelly 2021-06-19 automatic update - 2021-06-19
html 299a865 markellekelly 2021-06-18 automatic update - 2021-06-18
html 5c950bf markellekelly 2021-06-17 automatic update - 2021-06-17
html f993773 markellekelly 2021-06-16 automatic update - 2021-06-16
html c1e3b51 markellekelly 2021-06-15 automatic update - 2021-06-15
html 1206720 markellekelly 2021-06-14 automatic update - 2021-06-14
html 3ea85b9 markellekelly 2021-06-13 automatic update - 2021-06-13
html 75ed039 markellekelly 2021-06-12 automatic update - 2021-06-12
html 005ca36 markellekelly 2021-06-11 automatic update - 2021-06-11
html 2f45a15 markellekelly 2021-06-10 automatic update - 2021-06-10
html 566e9e0 markellekelly 2021-06-09 automatic update - 2021-06-09
html c9c705a markellekelly 2021-06-08 automatic update - 2021-06-08
html b99bc2e markellekelly 2021-06-07 automatic update - 2021-06-07
html 9b77f32 markellekelly 2021-06-06 automatic update - 2021-06-06
html 1efc12e markellekelly 2021-06-05 automatic update - 2021-06-05
html cc43658 markellekelly 2021-06-04 automatic update - 2021-06-04
html e5f8bd5 markellekelly 2021-06-03 automatic update - 2021-06-03
html 63d6085 markellekelly 2021-06-02 automatic update - 2021-06-02
html 9c34f0e markellekelly 2021-06-01 automatic update - 2021-06-01
html 415d557 markellekelly 2021-05-31 automatic update - 2021-05-31
html ceb70e1 markellekelly 2021-05-29 automatic update - 2021-05-29
html 38ccb95 markellekelly 2021-05-28 automatic update - 2021-05-28
html 57d1ace markellekelly 2021-05-27 automatic update - 2021-05-27
html 7271e0c markellekelly 2021-05-25 automatic update - 2021-05-25
html d51f4a5 markellekelly 2021-05-24 automatic update - 2021-05-24
html 18b0e98 markellekelly 2021-05-23 automatic update - 2021-05-23
html 500c5fb markellekelly 2021-05-22 automatic update - 2021-05-22
html 469314d markellekelly 2021-05-21 automatic update - 2021-05-21
html cbbc39d markellekelly 2021-05-20 automatic update - 2021-05-20
html 79ebcbf markellekelly 2021-05-19 automatic update - 2021-05-19
html d3d5a42 markellekelly 2021-05-18 automatic update - 2021-05-18
html 2766593 Damon Bayer 2021-05-17 Manual Update 2021-05-17
html f50d6d0 Damon Bayer 2021-05-13 Manual Update 2021-05-13
html afc6eca markellekelly 2021-05-12 automatic update - 2021-05-12
html 522636c markellekelly 2021-05-11 automatic update - 2021-05-11
html b11617e markellekelly 2021-05-10 automatic update - 2021-05-10
html fc2cf49 markellekelly 2021-05-09 automatic update - 2021-05-09
html 09cee58 markellekelly 2021-05-08 automatic update - 2021-05-08
html 81f04be markellekelly 2021-05-06 automatic update - 2021-05-06
html 1c7a6c4 markellekelly 2021-05-05 automatic update - 2021-05-05
html 2d8feff markellekelly 2021-05-04 automatic update - 2021-05-04
html 556ee4c markellekelly 2021-05-03 automatic update - 2021-05-03
html a0f0553 markellekelly 2021-05-02 automatic update - 2021-05-02
html e1b92ff markellekelly 2021-05-01 automatic update - 2021-05-01
html ba0461f markellekelly 2021-04-30 automatic update - 2021-04-30
html 60bdb2e markellekelly 2021-04-29 automatic update - 2021-04-29
html 9c705fd markellekelly 2021-04-28 automatic update - 2021-04-28
html 839fc4f markellekelly 2021-04-27 automatic update - 2021-04-27
html e42c5e5 Damon Bayer 2021-04-26 Fix for changed filename
html 248ed68 markellekelly 2021-04-20 automatic update - 2021-04-20
html 4d0fc9b markellekelly 2021-04-19 automatic update - 2021-04-19
html ccd1fed markellekelly 2021-04-18 automatic update - 2021-04-18
html e184b5a markellekelly 2021-04-17 automatic update - 2021-04-17
html dc6bd41 markellekelly 2021-04-16 automatic update - 2021-04-16
html 243f258 markellekelly 2021-04-15 automatic update - 2021-04-15
html a5a2784 markellekelly 2021-04-14 automatic update - 2021-04-14
html 795f956 markellekelly 2021-04-13 automatic update - 2021-04-13
html 1138120 Damon Bayer 2021-04-12 2021-04-12 City Data
html 5899f38 Damon Bayer 2021-04-12 Fix icons and manual update
Rmd 641ec11 Damon Bayer 2021-04-12 Remove here dependency
html efe5249 Damon Bayer 2021-04-06 New mapping method
Rmd 519c32a Catalina Medina 2021-04-05 removed static images and replaced with map gifs
html f8ea6d0 markellekelly 2021-04-02 automatic update - 2021-04-02
html 872db76 markellekelly 2021-04-01 automatic update - 2021-04-01
html b5480c2 markellekelly 2021-03-31 automatic update - 2021-03-31
html 346f381 markellekelly 2021-03-30 automatic update - 2021-03-30
html e31e287 markellekelly 2021-03-29 automatic update - 2021-03-29
html 6851dde markellekelly 2021-03-28 automatic update - 2021-03-28
html 4ca8dfa markellekelly 2021-03-27 automatic update - 2021-03-27
html 9ced51f markellekelly 2021-03-26 automatic update - 2021-03-26
html 30a6bf5 markellekelly 2021-03-25 automatic update - 2021-03-25
html e8ae3d3 markellekelly 2021-03-24 automatic update - 2021-03-24
html a91adfb markellekelly 2021-03-23 automatic update - 2021-03-23
html 5898ba8 markellekelly 2021-03-22 automatic update - 2021-03-22
html d50aef4 markellekelly 2021-03-21 automatic update - 2021-03-21
html 8c8a03a markellekelly 2021-03-20 automatic update - 2021-03-20
html b4c293e Damon Bayer 2021-03-19 Use new CHHS Data source
html 008eeb8 markellekelly 2021-03-12 automatic update - 2021-03-12
html 163ac1c markellekelly 2021-03-11 automatic update - 2021-03-11
html 6a764a7 markellekelly 2021-03-10 automatic update - 2021-03-10
html 1532a04 markellekelly 2021-03-09 automatic update - 2021-03-09
html 3261ca0 markellekelly 2021-03-08 automatic update - 2021-03-08
html 7840e73 markellekelly 2021-03-07 automatic update - 2021-03-07
html 5686f65 markellekelly 2021-03-06 automatic update - 2021-03-06
html b3fbef8 markellekelly 2021-03-05 automatic update - 2021-03-05
html c13cabc markellekelly 2021-03-04 automatic update - 2021-03-04
html a04daca markellekelly 2021-03-03 automatic update - 2021-03-03
html 8cb0261 markellekelly 2021-03-02 automatic update - 2021-03-02
html 7f5735e markellekelly 2021-03-01 automatic update - 2021-03-01
html fa31354 markellekelly 2021-02-28 automatic update - 2021-02-28
html 0bfe3fd markellekelly 2021-02-27 automatic update - 2021-02-27
html 44bf7f6 markellekelly 2021-02-26 automatic update - 2021-02-26
html 1fe7af9 markellekelly 2021-02-25 automatic update - 2021-02-25
html c23b2aa markellekelly 2021-02-24 automatic update - 2021-02-24
html c21fcf9 markellekelly 2021-02-23 automatic update - 2021-02-23
html 05396f0 markellekelly 2021-02-22 automatic update - 2021-02-22
html 615279d markellekelly 2021-02-21 automatic update - 2021-02-21
html a30744b markellekelly 2021-02-20 automatic update - 2021-02-20
html 59d798b markellekelly 2021-02-19 automatic update - 2021-02-19
html f8c357c markellekelly 2021-02-18 automatic update - 2021-02-18
html 990abd3 markellekelly 2021-02-17 automatic update - 2021-02-17
html e6d4aab markellekelly 2021-02-16 automatic update - 2021-02-16
html 2cf814e markellekelly 2021-02-15 automatic update - 2021-02-15
html cb567f6 markellekelly 2021-02-14 automatic update - 2021-02-14
html 6689508 markellekelly 2021-02-13 automatic update - 2021-02-13
html 3a9f4a7 markellekelly 2021-02-12 automatic update - 2021-02-12
html 42dbaa4 markellekelly 2021-02-11 automatic update - 2021-02-11
html 2fb7126 markellekelly 2021-02-10 automatic update - 2021-02-10
html 6315139 markellekelly 2021-02-09 automatic update - 2021-02-09
html cd704c7 markellekelly 2021-02-08 automatic update - 2021-02-08
html 8572861 markellekelly 2021-02-07 automatic update - 2021-02-07
html c15e62d markellekelly 2021-02-06 automatic update - 2021-02-06
html 5154336 markellekelly 2021-02-05 automatic update - 2021-02-05
html 3f25ae7 markellekelly 2021-02-04 automatic update - 2021-02-04
html 20f2a4d markellekelly 2021-02-03 automatic update - 2021-02-03
html 1d54e6a markellekelly 2021-02-02 automatic update - 2021-02-02
html 1e58c04 markellekelly 2021-02-01 automatic update - 2021-02-01
html 583b310 markellekelly 2021-01-31 automatic update - 2021-01-31
html df666bc markellekelly 2021-01-30 automatic update - 2021-01-30
html 7f882e0 markellekelly 2021-01-29 automatic update - 2021-01-29
Rmd 6a5d85c Damon Bayer 2021-01-29 December Map Update
html 6a5d85c Damon Bayer 2021-01-29 December Map Update
html 579408c markellekelly 2021-01-28 automatic update - 2021-01-28
html c484e26 markellekelly 2021-01-27 automatic update - 2021-01-27
html 71f9a7e markellekelly 2021-01-26 automatic update - 2021-01-26
html ba3d3ce markellekelly 2021-01-25 automatic update - 2021-01-25
html c44b8da markellekelly 2021-01-24 automatic update - 2021-01-24
html 1039ab8 markellekelly 2021-01-23 automatic update - 2021-01-23
html fe37e7c markellekelly 2021-01-22 automatic update - 2021-01-22
html 2273581 markellekelly 2021-01-21 automatic update - 2021-01-21
html 4d696ab markellekelly 2021-01-20 automatic update - 2021-01-20
html 9d8d764 markellekelly 2021-01-19 automatic update - 2021-01-19
html 847ffd7 markellekelly 2021-01-18 automatic update - 2021-01-18
html bccf59f markellekelly 2021-01-17 automatic update - 2021-01-17
html 96e62a6 markellekelly 2021-01-16 automatic update - 2021-01-16
html bd0505d markellekelly 2021-01-15 automatic update - 2021-01-15
html 0ca0428 vnminin 2021-01-14 changed lag from 11 to 5 days and increased spacing between dates
html fe24c63 markellekelly 2021-01-14 automatic update - 2021-01-14
html a5b4d5a markellekelly 2021-01-13 automatic update - 2021-01-13
html d3b8a7b markellekelly 2021-01-12 automatic update - 2021-01-12
html 81f8f8d markellekelly 2021-01-11 automatic update - 2021-01-11
html d874af5 markellekelly 2021-01-10 automatic update - 2021-01-10
html 1d2a964 markellekelly 2021-01-09 automatic update - 2021-01-09
html a4ad937 markellekelly 2021-01-08 automatic update - 2021-01-08
html 66fcd57 markellekelly 2021-01-07 automatic update - 2021-01-07
html f5bcd16 markellekelly 2021-01-06 automatic update - 2021-01-06
html c125818 markellekelly 2021-01-05 automatic update - 2021-01-05
html 0ac3d5a markellekelly 2021-01-04 automatic update - 2021-01-04
html e823760 markellekelly 2021-01-03 automatic update - 2021-01-03
html 97c4d33 markellekelly 2021-01-02 automatic update - 2021-01-02
html c7dc180 markellekelly 2021-01-01 automatic update - 2021-01-01
html 9c6ccc3 markellekelly 2020-12-31 automatic update - 2020-12-31
html 29c8e78 markellekelly 2020-12-30 automatic update - 2020-12-30
html 7826b90 markellekelly 2020-12-29 automatic update - 2020-12-29
html d50b839 markellekelly 2020-12-28 automatic update - 2020-12-28
html bfda24c markellekelly 2020-12-27 automatic update - 2020-12-27
html a154af4 markellekelly 2020-12-26 automatic update - 2020-12-26
html dcd525f markellekelly 2020-12-25 automatic update - 2020-12-25
html 6644b37 markellekelly 2020-12-24 automatic update - 2020-12-24
html 35209de markellekelly 2020-12-23 automatic update - 2020-12-23
html 49a1837 markellekelly 2020-12-22 automatic update - 2020-12-22
Rmd b3b8c9b Jessica George 2020-12-18 Update times for OC maps
html b3b8c9b Jessica George 2020-12-18 Update times for OC maps
html 2b1530e markellekelly 2020-12-18 automatic update - 2020-12-18
Rmd dc0429c Jessica George 2020-12-18 Updated maps
html dc0429c Jessica George 2020-12-18 Updated maps
html 85af75a markellekelly 2020-12-17 automatic update - 2020-12-17
html aa6455b markellekelly 2020-12-16 automatic update - 2020-12-16
html 0ee5762 markellekelly 2020-12-15 automatic update - 2020-12-15
html 9668f9d Damon Bayer 2020-12-14 Publish new city result
html b4a2c23 markellekelly 2020-12-14 automatic update - 2020-12-14
html 2b09f1a Damon Bayer 2020-12-14 misc fixes
html 76448e0 markellekelly 2020-12-10 automatic update - 2020-12-10
html bc96ef6 markellekelly 2020-12-09 automatic update - 2020-12-09
html aabffb7 markellekelly 2020-12-08 automatic update - 2020-12-08
html ebff46d markellekelly 2020-12-07 automatic update - 2020-12-07
html 1268ef5 markellekelly 2020-12-06 automatic update - 2020-12-06
html 5267b99 markellekelly 2020-12-05 automatic update - 2020-12-05
html 25fffe6 markellekelly 2020-12-04 automatic update - 2020-12-04
Rmd d598731 Damon Bayer 2020-12-03 October Maps
html d598731 Damon Bayer 2020-12-03 October Maps
html f08a457 markellekelly 2020-12-03 automatic update - 2020-12-03
html 2fdb3fd markellekelly 2020-12-02 automatic update - 2020-12-02
html 116465c Jessica George 2020-12-01 oc-city-changes
html b6a39bf markellekelly 2020-12-01 automatic update - 2020-12-01
html a5466ed markellekelly 2020-11-30 automatic update - 2020-11-30
html ceb22c2 markellekelly 2020-11-29 automatic update - 2020-11-29
html c9f55bd markellekelly 2020-11-28 automatic update - 2020-11-28
html ee86766 markellekelly 2020-11-27 automatic update - 2020-11-27
html 3083f07 markellekelly 2020-11-26 automatic update - 2020-11-26
html 13f2be0 markellekelly 2020-11-25 automatic update - 2020-11-25
html 42be784 markellekelly 2020-11-24 automatic update - 2020-11-24
html 85ee3ad markellekelly 2020-11-23 automatic update - 2020-11-23
html 34c1f94 markellekelly 2020-11-22 automatic update - 2020-11-22
html 28839c9 markellekelly 2020-11-21 automatic update - 2020-11-21
html be56dc4 markellekelly 2020-11-20 automatic update - 2020-11-20
html 3b70bd3 markellekelly 2020-11-19 automatic update - 2020-11-19
html f2d8202 markellekelly 2020-11-18 automatic update - 2020-11-18
html 22759c1 Damon Bayer 2020-11-17 Nov 16 Update
html 488493a markellekelly 2020-11-17 automatic update - 2020-11-17
html f43b0f8 markellekelly 2020-11-16 automatic update - 2020-11-16
html c5a66e5 Jessica George 2020-11-15 Coastal OC Color Adjustment
html 11522aa markellekelly 2020-11-15 automatic update - 2020-11-15
html c8e0e51 markellekelly 2020-11-14 automatic update - 2020-11-14
html 0ab8f6d markellekelly 2020-11-13 automatic update - 2020-11-13
html 39a5124 markellekelly 2020-11-12 automatic update - 2020-11-12
html f2f3802 Damon Bayer 2020-11-12 Nov 9 Update + x-axis modification
html 2c51830 Jessica George 2020-11-11 nov9-updates
html 37750c4 markellekelly 2020-11-11 automatic update - 2020-11-11
html 337210b markellekelly 2020-11-10 automatic update - 2020-11-10
html ef5427d markellekelly 2020-11-09 automatic update - 2020-11-09
html ca57998 markellekelly 2020-11-08 automatic update - 2020-11-08
html c2f0040 markellekelly 2020-11-07 automatic update - 2020-11-07
html b9935a0 markellekelly 2020-11-06 automatic update - 2020-11-06
html 0521670 markellekelly 2020-11-05 automatic update - 2020-11-05
html 8ecb0d7 vnminin 2020-11-04 again resolved silly html conflicts
html c558b0d markellekelly 2020-11-04 automatic update - 2020-11-04
html ddd7d03 Jessica George 2020-11-04 nov2-updates
html f1efa15 markellekelly 2020-11-03 automatic update - 2020-11-03
html cdda3c8 markellekelly 2020-11-02 automatic update - 2020-11-02
html f0eb03d markellekelly 2020-11-01 automatic update - 2020-11-01
html 734187b markellekelly 2020-10-31 automatic update - 2020-10-31
html 853af28 markellekelly 2020-10-29 automatic update - 2020-10-29
html 2977434 markellekelly 2020-10-28 automatic update - 2020-10-28
html ae0d991 markellekelly 2020-10-27 automatic update - 2020-10-27
html c03f470 Thanasi Bakis 2020-10-26 Oct 26 updates
html e27692a markellekelly 2020-10-26 automatic update - 2020-10-26
html 179b482 markellekelly 2020-10-25 automatic update - 2020-10-25
html 80b8055 markellekelly 2020-10-24 automatic update - 2020-10-24
html 6b6f62e markellekelly 2020-10-23 automatic update - 2020-10-23
html ae64517 markellekelly 2020-10-22 automatic update - 2020-10-22
html 74c516b markellekelly 2020-10-21 automatic update - 2020-10-21
html 1d49990 markellekelly 2020-10-20 automatic update - 2020-10-20
Rmd 2a89a8b vnminin 2020-10-20 updated map time stamps
html 2a89a8b vnminin 2020-10-20 updated map time stamps
html 0c2be58 vnminin 2020-10-20 rebuilt because some maps were not showing up
Rmd f2940c4 Thanasi Bakis 2020-10-20 Adjusted map positions
html f2940c4 Thanasi Bakis 2020-10-20 Adjusted map positions
html 149bf66 Thanasi Bakis 2020-10-20 Rebuild with changes
Rmd 6dda957 Thanasi Bakis 2020-10-19 New maps and city trends
html 6dda957 Thanasi Bakis 2020-10-19 New maps and city trends
html 08d1e37 markellekelly 2020-10-19 automatic update - 2020-10-19
html 9bfe943 markellekelly 2020-10-18 automatic update - 2020-10-18
html 78e874b markellekelly 2020-10-17 automatic update - 2020-10-17
html cb0af7f markellekelly 2020-10-16 automatic update - 2020-10-16
html 6214d3e Damon Bayer 2020-10-16 Full rebuild
html e295ddb Thanasi Bakis 2020-10-16 Added OC 5 Most Populous Cities comparison
html 604470a Thanasi Bakis 2020-10-15 Added OC cities comparison dropdown
html f475202 markellekelly 2020-10-15 automatic update - 2020-10-15
html 9542e72 vnminin 2020-10-15 rebuilt the website after la-norcal. -> la-norcal.html fix
html 330df49 markellekelly 2020-10-13 automatic update - 2020-10-13
html c07d12e markellekelly 2020-10-12 automatic update - 2020-10-12
html fe159f4 markellekelly 2020-10-11 automatic update - 2020-10-11
html 02325d6 markellekelly 2020-10-10 automatic update - 2020-10-10
html 699c993 markellekelly 2020-10-09 automatic update - 2020-10-09
html 2e3d5e3 markellekelly 2020-10-08 automatic update - 2020-10-08
html ba2367e markellekelly 2020-10-07 automatic update - 2020-10-07
html c68c3ef markellekelly 2020-10-06 automatic update - 2020-10-06
html 179221b markellekelly 2020-10-05 automatic update - 2020-10-05
html 615814b Damon Bayer 2020-10-04 Fix Stay at Home label location
html 6bd7330 markellekelly 2020-10-04 automatic update - 2020-10-04
html f305160 markellekelly 2020-10-03 automatic update - 2020-10-03
html c8bae6d markellekelly 2020-10-02 automatic update - 2020-10-02
html c829b01 markellekelly 2020-10-01 automatic update - 2020-10-01
html c81c8f5 markellekelly 2020-09-30 add oc-cities
html 522513d markellekelly 2020-09-30 automatic update - 2020-09-30
html c2e9a01 markellekelly 2020-09-29 automatic update - 2020-09-29
html 5ada0ac markellekelly 2020-09-28 automatic update - 2020-09-28
html 10029b4 markellekelly 2020-09-27 automatic update - 2020-09-27
html 1453b97 markellekelly 2020-09-24 automatic update - 2020-09-24
html 8196bbf markellekelly 2020-09-23 automatic update - 2020-09-23
html fa99b64 markellekelly 2020-09-22 automatic update - 2020-09-22
html c661c7b markellekelly 2020-09-21 automatic update - 2020-09-21
html c926c92 markellekelly 2020-09-20 automatic update - 2020-09-20
html 805f322 markellekelly 2020-09-19 automatic update - 2020-09-19
html 2dfedff markellekelly 2020-09-18 automatic update - 2020-09-18
html 46d1c05 markellekelly 2020-09-17 automatic update - 2020-09-17
html 32397cb markellekelly 2020-09-16 automatic update - 2020-09-16
html 8a2d2d7 markellekelly 2020-09-15 automatic update - 2020-09-15
html 822d8a3 markellekelly 2020-09-14 automatic update - 2020-09-14
Rmd ca8f3dc Damon Bayer 2020-09-13 Update maps time stamps
html ca8f3dc Damon Bayer 2020-09-13 Update maps time stamps
html ef2f2be markellekelly 2020-09-12 automatic update - 2020-09-12
html f0cfcae markellekelly 2020-09-11 automatic update - 2020-09-11
html 7ad9506 markellekelly 2020-09-10 automatic update - 2020-09-10
html 51bc9d4 markellekelly 2020-09-09 automatic update - 2020-09-09
html 0c63951 markellekelly 2020-09-08 automatic update - 2020-09-08
html cb3b11a markellekelly 2020-09-07 automatic update - 2020-09-07
html ac05fe5 markellekelly 2020-09-06 automatic update - 2020-09-06
html b42a33b markellekelly 2020-09-05 automatic update - 2020-09-05
html a61fdd8 markellekelly 2020-09-04 automatic update - 2020-09-04
Rmd 27325c6 Damon Bayer 2020-09-03 August Maps
html 27325c6 Damon Bayer 2020-09-03 August Maps
html e2709b0 markellekelly 2020-09-03 automatic update - 2020-09-03
html 5296774 markellekelly 2020-09-02 automatic update - 2020-09-02
html 6048fdf markellekelly 2020-09-01 automatic update - 2020-09-01
html a27d38f markellekelly 2020-08-31 automatic update - 2020-08-31
html 74ceb0a markellekelly 2020-08-30 automatic update - 2020-08-30
html 44a84ad markellekelly 2020-08-29 automatic update - 2020-08-29
html 33918be markellekelly 2020-08-28 automatic update - 2020-08-28
html c2d1536 markellekelly 2020-08-27 automatic update - 2020-08-27
html c96e3f3 vnminin 2020-08-27 consistent message above trend plots
html cf421b9 markellekelly 2020-08-26 automatic update - 2020-08-26
html 9d099cd vnminin 2020-08-25 short dropdown menu names
html 726e8dc markellekelly 2020-08-25 automatic update - 2020-08-25
html e239a00 vnminin 2020-08-25 added a note about dropdown menus
html 518db49 Rachel Longjohn 2020-08-24 Merge branch ‘master’ into county-sets
html 2559f5d Rachel Longjohn 2020-08-24 add more county sets
html b79277f markellekelly 2020-08-24 automatic update - 2020-08-24
html f932f34 markellekelly 2020-08-23 automatic update - 2020-08-23
html eaad166 markellekelly 2020-08-22 automatic update - 2020-08-22
html 8b79b5e vnminin 2020-08-21 added Andrew as an additional media contact
html f30d34d markellekelly 2020-08-21 automatic update - 2020-08-21
html 7069376 markellekelly 2020-08-20 automatic update - 2020-08-20
html 223088a markellekelly 2020-08-19 automatic update - 2020-08-19
html 64a83bf markellekelly 2020-08-18 automatic update - 2020-08-18
html ae98627 vnminin 2020-08-14 daily date pull
html 24e4ed4 vnminin 2020-08-13 data update
html 616ee7e vnminin 2020-08-12 daily data update
html 8db6eb5 vnminin 2020-08-11 pushed a note about reporting system problems
html 0803f2b vnminin 2020-08-11 data update
html 19f2315 vnminin 2020-08-10 push with updated data
html a5927e7 vnminin 2020-08-09 rebuilding with new data
html fb0028a vnminin 2020-08-08 ca portal got data
html 9589b6d vnminin 2020-08-07 two time stamps
html 60756e0 Damon Bayer 2020-08-07 data update
html b3f0a7a vnminin 2020-08-06 rebuilding to fix testing not linking to itself
html 35e30c1 vnminin 2020-08-06 daily data update; I am a good robot
html 7334400 vnminin 2020-08-05 data update
html 6466f12 vnminin 2020-08-04 data pull and fixed the last date being cut off
html 5db0d2e vnminin 2020-08-03 data update
html 4afb037 vnminin 2020-08-02 forgot to republish
html e3847ed vnminin 2020-08-02 added testing maps
Rmd a2c2c61 vnminin 2020-08-01 added Software section to About
html a2c2c61 vnminin 2020-08-01 added Software section to About
Rmd 51fac09 vnminin 2020-08-01 added page headers to incidence and positive maps
html 51fac09 vnminin 2020-08-01 added page headers to incidence and positive maps
Rmd e024ad3 Damon Bayer 2020-07-31 Positivity Maps + Navigation Updates
html e024ad3 Damon Bayer 2020-07-31 Positivity Maps + Navigation Updates



Fraction of positive COVID-19 tests mapped to OC zip codes

Animations Using the R Language

Data provided by the Orange County Health Care Agency.
Most recent date in data used was 2022-05-24.
Last updated on 2022-06-08.


R version 4.2.0 (2022-04-22)
Platform: aarch64-apple-darwin20 (64-bit)
Running under: macOS Monterey 12.4

Matrix products: default
LAPACK: /Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/lib/libRlapack.dylib

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
 [1] gridExtra_2.3     animation_2.7     ggspatial_1.1.5   sf_1.0-7         
 [5] viridis_0.6.2     viridisLite_0.4.0 forcats_0.5.1     stringr_1.4.0    
 [9] dplyr_1.0.9       purrr_0.3.4       readr_2.1.2       tidyr_1.2.0      
[13] tibble_3.1.7      ggplot2_3.3.6     tidyverse_1.3.1   workflowr_1.7.0  

loaded via a namespace (and not attached):
 [1] fs_1.5.2           lubridate_1.8.0    bit64_4.0.5        httr_1.4.3        
 [5] rprojroot_2.0.3    tools_4.2.0        backports_1.4.1    bslib_0.3.1       
 [9] utf8_1.2.2         R6_2.5.1           KernSmooth_2.23-20 DBI_1.1.2         
[13] colorspace_2.0-3   withr_2.5.0        tidyselect_1.1.2   processx_3.5.3    
[17] bit_4.0.4          compiler_4.2.0     git2r_0.30.1       cli_3.3.0         
[21] rvest_1.0.2        xml2_1.3.3         labeling_0.4.2     sass_0.4.1        
[25] scales_1.2.0       classInt_0.4-3     callr_3.7.0        proxy_0.4-26      
[29] digest_0.6.29      rmarkdown_2.14     pkgconfig_2.0.3    htmltools_0.5.2   
[33] dbplyr_2.2.0       fastmap_1.1.0      rlang_1.0.2        readxl_1.4.0      
[37] rstudioapi_0.13    jquerylib_0.1.4    generics_0.1.2     farver_2.1.0      
[41] zoo_1.8-10         jsonlite_1.8.0     vroom_1.5.7        magrittr_2.0.3    
[45] Rcpp_1.0.8.3       munsell_0.5.0      fansi_1.0.3        lifecycle_1.0.1   
[49] stringi_1.7.6      whisker_0.4        yaml_2.3.5         grid_4.2.0        
[53] parallel_4.2.0     promises_1.2.0.1   crayon_1.5.1       lattice_0.20-45   
[57] haven_2.5.0        hms_1.1.1          knitr_1.39         ps_1.7.0          
[61] pillar_1.7.0       reprex_2.0.1       glue_1.6.2         evaluate_0.15     
[65] getPass_0.2-2      modelr_0.1.8       vctrs_0.4.1        tzdb_0.3.0        
[69] httpuv_1.6.5       cellranger_1.1.0   gtable_0.3.0       assertthat_0.2.1  
[73] xfun_0.31          broom_0.8.0        e1071_1.7-11       later_1.3.0       
[77] class_7.3-20       units_0.8-0        ellipsis_0.3.2